Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTCAGAGGCATTTGCCAGGTG
((((((((...(((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278172
GeneSymbolSDHC
Binding site3488,3512
Score0.923
Seed1
Au0.441
Energy-17.6
Binding len15
Me-9.061
Phylopstem3.34617225
Phylopflank1.9469146925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure