Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGAGCAGCTGCT
..((((((((.....(((((.&)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278172
GeneSymbolSDHC
Binding site835,851
Score0.923
Seed1
Au0.588
Energy-18.7
Binding len16
Me-14.01
Phylopstem0.7749307225000001
Phylopflank0.5092787805
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure