Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCATAAGTGGTAGTCCAAATTTTCTTTAAGCAGCTGCT
..((((((((.((((.(((((&)))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278173
GeneSymbolZNF33A
Binding site3891,3936
Score0.846
Seed1
Au0.5
Energy-21.2
Binding len45
Me-8.015
Phylopstem0.13550510925
Phylopflank-0.022943710187499952
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end7
Position3UTR
2D Structure