Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAG
((((..((((((((((.((((&.)))).))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278183
GeneSymbolEOMES
Binding site2321,2372
Score1.0
Seed0
Au0.588
Energy-23.9
Binding len23
Me-9.958
Phylopstem5.6297376
Phylopflank3.5452891924999994
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure