Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCTGCAGC
(((((((((((((........&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278197
GeneSymbolCDK5RAP3
Binding site596,611
Score1.0
Seed1
Au0.441
Energy-21.2
Binding len15
Me-5.763
Phylopstem4.703828571428572
Phylopflank3.6174834762499994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure