Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTCAGCCAACACAGCTGCC
..(((((((.(((((.(((((&))))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278199
GeneSymbolSNX2
Binding site1666,1688
Score0.808
Seed1
Au0.574
Energy-20.5
Binding len22
Me-6.433
Phylopstem6.595168571428571
Phylopflank5.665126700000001
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure