Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACTACAGGTGTGTGCCAGC
..((((((((((.(((((.(((&))))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278202
GeneSymbolCLCC1
Binding site3200,3221
Score1.0
Seed1
Au0.559
Energy-21.1
Binding len21
Me-6.246
Phylopstem-0.565746596
Phylopflank-0.215148525625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure