Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278202
GeneSymbolCLCC1
Binding site3419,3442
Score1.0
Seed1
Au0.529
Energy-18.0
Binding len16
Me-8.406
Phylopstem1.1245129999999999
Phylopflank1.21186689375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure