Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278203
GeneSymbolCLCC1
Binding site2942,2965
Score1.0
Seed1
Au0.529
Energy-18.0
Binding len16
Me-8.406
Phylopstem0.14523302499999996
Phylopflank0.39109962125000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure