Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACAAGAAAACGCAGTTGTAAA
((((((((((((((((.....&))))).......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278203
GeneSymbolCLCC1
Binding site4032,4056
Score0.923
Seed1
Au0.676
Energy-18.8
Binding len24
Me-3.938
Phylopstem4.245717743478261
Phylopflank1.837403279500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure