Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAACTCAAAGTGTGGTCTGTGGACCAGCAGCGGCAGT
((((.((((((((((((((((&))))))))))).....................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278213
GeneSymbolLRRC20
Binding site2299,2342
Score0.923
Seed0
Au0.456
Energy-25.5
Binding len43
Me-8.057
Phylopstem0.40852245621621636
Phylopflank0.3713343249999999
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure