Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGCCAGGG
.(((((((.(((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278217
GeneSymbolCDK5RAP3
Binding site1742,1753
Score0.846
Seed1
Au0.412
Energy-15.5
Binding len11
Me-7.964
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure