Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGG
(((((((((((((((((((((&))))))))))............))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278249
GeneSymbolRNF214
Binding site1900,1935
Score0.846
Seed1
Au0.574
Energy-17.9
Binding len35
Me-3.938
Phylopstem0.7461156735294118
Phylopflank1.9416963249999997
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end8
Position3UTR
2D Structure