Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGACGGAGGGTTTT
(((((((.(..((((((((..&))))))))..).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278260
GeneSymbolCARHSP1
Binding site2709,2729
Score0.846
Seed1
Au0.441
Energy-26.5
Binding len20
Me-10.318
Phylopstem0.2263342375
Phylopflank0.28662599500000013
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure