Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGACGGAGGGTTTT
(((((((.(..((((((((..&))))))))..).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278261
GeneSymbolCARHSP1
Binding site2854,2874
Score0.923
Seed1
Au0.441
Energy-26.5
Binding len20
Me-10.318
Phylopstem0.8369822
Phylopflank-0.20914083125
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure