Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCGGGGGGCTGGGGTGGTG
..(((((.(((((.((((.((&)).))))))))).)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278263
GeneSymbolCARHSP1
Binding site1271,1291
Score1.0
Seed0
Au0.338
Energy-26.1
Binding len20
Me-8.127
Phylopstem-0.17910060000000003
Phylopflank0.05193618375000002
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure