Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCAGGCTGCGC
.(((((((((((.........&)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278263
GeneSymbolCARHSP1
Binding site11,24
Score0.923
Seed1
Au0.358
Energy-18.6
Binding len13
Me-6.908
Phylopstem0.43674008333333325
Phylopflank0.03866020972499999
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end0
Position5UTR
2D Structure