Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGACGGAGGGTTTT
(((((((.(..((((((((..&))))))))..).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278264
GeneSymbolCARHSP1
Binding site2731,2751
Score0.846
Seed1
Au0.441
Energy-26.5
Binding len20
Me-10.318
Phylopstem-0.6252457499999999
Phylopflank-0.11710724199999999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure