Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCGGGGGGCTGGGGTGGTG
..(((((.(((((.((((.((&)).))))))))).)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278264
GeneSymbolCARHSP1
Binding site1413,1433
Score0.923
Seed0
Au0.338
Energy-26.1
Binding len20
Me-8.127
Phylopstem-0.36986603999999995
Phylopflank-0.5233724149999999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure