Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGACGGAGGGTTTT
(((((((.(..((((((((..&))))))))..).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001278266
GeneSymbolCARHSP1
Binding site2623,2643
Score1.0
Seed1
Au0.441
Energy-26.5
Binding len20
Me-10.318
Phylopstem1.3085565900000002
Phylopflank1.7056456785000003
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure