Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCGCGGCTGTAGC
((((((((((((((.......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278266
GeneSymbolCARHSP1
Binding site36,51
Score1.0
Seed1
Au0.368
Energy-23.4
Binding len15
Me-4.906
Phylopstem-0.12069267221428572
Phylopflank0.17144661153846158
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure