Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAATCGCAGAGGAGAACTGCGAC
(((((((((((((((.((((.&))))))))))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278273
GeneSymbolSRPK2
Binding site2048,2075
Score0.846
Seed1
Au0.471
Energy-20.7
Binding len27
Me-4.171
Phylopstem4.820103454545455
Phylopflank3.197240636249999
Longest consecutive pairings13
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure