Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCACCTCAGCTGCAC
.((((((((.((((((.....&)))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278273
GeneSymbolSRPK2
Binding site1094,1112
Score0.942
Seed1
Au0.574
Energy-19.6
Binding len18
Me-5.036
Phylopstem4.95348875
Phylopflank3.5341631124999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure