Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTGGAGATTGCCAGGTG
((((((((..((((.(......&).)))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330691
GeneSymbolCEP78
Binding site5836,5856
Score0.846
Seed1
Au0.574
Energy-16.6
Binding len20
Me-6.972
Phylopstem0.41833497500000005
Phylopflank0.11370230500000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure