Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACACTGGTTCATGTTTGCAGTTACTGTTGTACATTGCAT
.(((((((((((.((((((((&))))))))))...........))))).............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278278
GeneSymbolE2F6
Binding site1440,1484
Score0.846
Seed1
Au0.647
Energy-16.6
Binding len44
Me-5.082
Phylopstem0.6842619885714285
Phylopflank0.6825979700000001
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure