Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGAAAGCAGCTAGGCC
..((((((((..(((.(((((&))))))))..))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278283
GeneSymbolRPE
Binding site221,242
Score0.846
Seed1
Au0.485
Energy-19.0
Binding len21
Me-11.362
Phylopstem1.6845029100000002
Phylopflank5.481831142500001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position5UTR
2D Structure