Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTACGCTGTAGCA
.....(((((((.((((((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278288
GeneSymbolRPE
Binding site1810,1826
Score0.846
Seed0
Au0.603
Energy-16.4
Binding len16
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure