Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCTGGGGGATGAGATGTTGGCGGCTGCGC
.(((((((((((((((.....&)))))).................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278290
GeneSymbolZNF3
Binding site256,289
Score0.923
Seed1
Au0.397
Energy-20.8
Binding len33
Me-3.793
Phylopstem0.16319723749999998
Phylopflank0.14030462500000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure