Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCATCCCTGCAGCTGCC
..((((((((((.((...(((&)))...))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278296
GeneSymbolCFAP65
Binding site661,683
Score0.846
Seed1
Au0.368
Energy-21.2
Binding len22
Me-6.479
Phylopstem-0.39570214000000004
Phylopflank-0.294740055
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure