Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGACTGGAGGATGTAAA
(((((.((.((((((.(((((&))))))))))).))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278298
GeneSymbolCOL6A5
Binding site1416,1438
Score0.846
Seed0
Au0.471
Energy-19.3
Binding len22
Me-7.128
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure