Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGCAGCCGCATCAAGCAAA
((((...(((((((((...((&))...)))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278298
GeneSymbolCOL6A5
Binding site3058,3081
Score0.846
Seed0
Au0.515
Energy-18.7
Binding len23
Me-11.501
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure