Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGCGACTGCAGTC
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278301
GeneSymbolEPHA6
Binding site380,397
Score0.923
Seed0
Au0.441
Energy-20.1
Binding len17
Me-13.666
Phylopstem1.7788804545454546
Phylopflank2.4826981998874995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure