Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTCACACCGCTGCAGCTGCT
..(((((((((((.((.....&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278309
GeneSymbolAKAP3
Binding site3066,3088
Score1.0
Seed1
Au0.412
Energy-23.0
Binding len16
Me-5.814
Phylopstem0.07614154545454545
Phylopflank0.053843227500000014
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure