Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAATGGGTAGCTGCC
..((((((((.((((.((((.&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278309
GeneSymbolAKAP3
Binding site2878,2897
Score1.0
Seed1
Au0.544
Energy-21.3
Binding len19
Me-8.015
Phylopstem2.8031409999999997
Phylopflank1.3571469514999999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure