Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACCTGGCAGCGCAC
.(((.(((((((((((.....&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278343
GeneSymbolACTN2
Binding site1520,1537
Score0.846
Seed0
Au0.324
Energy-19.3
Binding len17
Me-7.912
Phylopstem5.7595881538461535
Phylopflank5.31590074725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure