Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACCACCTGTGGAGTGGAGAGACAAGCTCTTCCTGCAGA
(((((((((((((((((((((&)))))))))))....))))....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278346
GeneSymbolPHYKPL
Binding site1121,1167
Score0.846
Seed1
Au0.515
Energy-19.1
Binding len46
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end8
Position5UTR
2D Structure