Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGGCCGAGCTT
....((((.(((((.(((((.&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363821
GeneSymbolUPRT
Binding site72,88
Score0.923
Seed0
Au0.588
Energy-19.8
Binding len16
Me-11.338
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure