Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCTGCC
..(((((((((((........&))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278365
GeneSymbolRHOH
Binding site624,636
Score0.846
Seed1
Au0.426
Energy-20.9
Binding len12
Me-6.782
Phylopstem5.686130272727272
Phylopflank4.39790724
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure