Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGTGCCACGGGGGCTGCAGA
((((((((.(.((.(((.((.&.))..))).)).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278375
GeneSymbolMPP2
Binding site316,339
Score0.846
Seed1
Au0.397
Energy-20.6
Binding len23
Me-8.676
Phylopstem0.06439848249999999
Phylopflank0.10399027325
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure