Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGCAGGTGCAAA
(((((.((((.(((((.....&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278387
GeneSymbolSLC38A1
Binding site6356,6372
Score0.872
Seed0
Au0.5
Energy-20.2
Binding len16
Me-8.663
Phylopstem2.250724
Phylopflank3.761538643749999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure