Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCGCAGACTGTT
..(((((((((((((......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278387
GeneSymbolSLC38A1
Binding site3976,3991
Score1.0
Seed1
Au0.544
Energy-19.7
Binding len15
Me-5.19
Phylopstem-0.3429313571428572
Phylopflank0.13609963250000004
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure