Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTTCCAGA
..((((...(((((((((....&))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278388
GeneSymbolSLC38A1
Binding site1342,1357
Score0.923
Seed0
Au0.706
Energy-17.0
Binding len15
Me-9.871
Phylopstem0.3685560222222222
Phylopflank0.28059465499999997
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure