Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCGCAGACTGTT
..(((((((((((((......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278388
GeneSymbolSLC38A1
Binding site3738,3753
Score1.0
Seed1
Au0.544
Energy-19.7
Binding len15
Me-5.19
Phylopstem0.32449407142857145
Phylopflank0.4432077460000002
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure