Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCTGCAGCTGGAAA
((.((((((((((((......&))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363826
GeneSymbolKIAA0100
Binding site5555,5572
Score0.846
Seed0
Au0.515
Energy-21.4
Binding len17
Me-5.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure