Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACCACCTTGAGCTGTGAA
((((((((..(((.((((((.&)))))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278438
GeneSymbolFNDC3A
Binding site1383,1405
Score0.808
Seed1
Au0.544
Energy-18.8
Binding len22
Me-7.093
Phylopstem3.0285503
Phylopflank4.3028734525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure