Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCGCTGCTGCC
..(((((.((((((((..(((&))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278439
GeneSymbolCLASRP
Binding site924,942
Score0.923
Seed0
Au0.309
Energy-26.1
Binding len18
Me-7.271
Phylopstem-0.60499875
Phylopflank2.2041404024999998
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure