Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCGCAGCAGCT
..((.(((((((((((..(((&)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278439
GeneSymbolCLASRP
Binding site1381,1399
Score0.846
Seed0
Au0.279
Energy-26.0
Binding len18
Me-9.076
Phylopstem0.8029972727272727
Phylopflank0.9469573030000003
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure