Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTACACATTTTATGTGCCAGA
..((((((((.(((((......&.)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278460
GeneSymbolCOBLL1
Binding site4274,4298
Score0.846
Seed1
Au0.647
Energy-15.7
Binding len18
Me-7.782
Phylopstem0.22502674999999994
Phylopflank0.151529886125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure