Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTATGTGCGGCCGTGCTGCAGA
(((((((.(((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278460
GeneSymbolCOBLL1
Binding site52,76
Score0.923
Seed1
Au0.265
Energy-23.9
Binding len18
Me-6.251
Phylopstem0.12305466666666666
Phylopflank0.17529197125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure