Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCATCCGTACCTTTTGCTGTG
..((((((((((.(((((((.&))))))).)))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278461
GeneSymbolCOBLL1
Binding site8016,8041
Score0.923
Seed1
Au0.529
Energy-20.0
Binding len25
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure